Entry Detail


General Information

Database ID:exR0390668
RNA Name:ADAM10
RNA Type:mRNA
Chromosome:chr15
Starnd:-
Coordinate:
Start Site(bp):58588809End Site(bp):58749791
External Links:ENSG00000137845



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
RPS11
chr19
49496365
49499708
+
THUMPD3
chr3
9362971
9386791
+
ATXN3
chr14
92044496
92106621
-
NUDT21
chr16
56429133
56452199
-
MORF4L1
chr15
78810487
78898139
+
RPS24
chr10
78033760
78056813
+
SMARCC1
chr3
47585269
47782106
-
YY1
chr14
100238298
100282788
+
RB1CC1
chr8
52622458
52745843
-
SPATS2L
chr2
200305881
200482264
+
MAPK9
chr5
180233143
180292099
-
RFLNA
chr12
123973241
124316024
+
TCTN3
chr10
95663396
95694143
-
RPL13
chr16
89560657
89566828
+
MRPL30
chr2
99181152
99199561
+
METTL2B
chr7
128476729
128506602
+
MPZL1
chr1
167721192
167791919
+
OSBP
chr11
59574398
59615774
-
PBX1
chr1
164555584
164899296
+
TAB2
chr6
149218641
149411613
+
RBM42
chr19
35629030
35637686
+
WBP11
chr12
14784582
14803486
-
TMEM189
chr20
50118254
50153734
-
TRIM28
chr19
58544064
58550722
+
GNAI3
chr1
109548615
109600195
+
ANXA6
chr5
151100706
151157785
-
XRCC6
chr22
41621119
41664048
+
PGM3
chr6
83161150
83193936
-
ACTN4
chr19
38647649
38731589
+
E2F2
chr1
23506438
23531233
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-1248
chr3
186786675
186786701
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL096870.2
chr14
24209646
24215987
-
AC068790.8
chr12
123973215
124088594
+
AL645465.1
chr1
244375100
244409592
-
FGD5-AS1
chr3
14920347
14948424
-
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA