Entry Detail


General Information

Database ID:exR0390687
RNA Name:ADAM9
RNA Type:mRNA
Chromosome:chr8
Starnd:+
Coordinate:
Start Site(bp):38996869End Site(bp):39105261
External Links:ENSG00000168615



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CAPNS1
chr19
36139953
36150353
+
ARID3B
chr15
74541177
74598131
+
TOR1AIP2
chr1
179839967
179877803
-
MFSD14C
chr9
96887373
97013708
-
UHRF1
chr19
4903080
4962154
+
PCNP
chr3
101574180
101594465
+
LDHA
chr11
18394560
18408425
+
ST8SIA1
chr12
22063773
22437041
-
PNMA8A
chr19
46466491
46471563
-
ORC2
chr2
200908977
200963680
-
EEF2
chr19
3976056
3985463
-
RPA1
chr17
1829702
1900082
+
TCEA1
chr8
53966552
54022456
-
TMSB4X
chrX
12975110
12977227
+
RPL18
chr19
48615328
48619184
-
FNIP1
chr5
131641714
131797063
-
CANX
chr5
179678628
179731641
+
POP1
chr8
98117293
98159835
+
PLXNA1
chr3
126988594
127037392
+
CDK4
chr12
57747727
57756013
-
KNTC1
chr12
122527246
122626396
+
MT-CO1
chrMT
5904
7445
+
RPL4
chr15
66498015
66524532
-
TRA2B
chr3
185914558
185938103
-
EVX2
chr2
176077472
176083913
-
NDUFB7
chr19
14566078
14572066
-
ACRBP
chr12
6638075
6647433
-
PRRC1
chr5
127517609
127555089
+
HSP90AB1
chr6
44246166
44253888
+
LPCAT3
chr12
6976185
7018477
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AP001496.2
chr18
5232876
5238526
-
NEAT1
chr11
65422774
65445540
+
PIK3CD-AS2
chr1
9672426
9687555
-
SLFNL1-AS1
chr1
41014590
41043890
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA