Entry Detail


General Information

Database ID:exR0390690
RNA Name:ADAMTS10
RNA Type:mRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):8580240End Site(bp):8610735
External Links:ENSG00000142303



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010422.3
chr19
12643831
12648397
-
ALDOA
chr16
30064164
30070457
+
ATXN2L
chr16
28823035
28837237
+
BIN1
chr2
127048027
127107288
-
CD59
chr11
33703010
33736491
-
HDDC3
chr15
90929964
90935196
-
HNRNPDL
chr4
82422564
82430408
-
HSP90AB1
chr6
44246166
44253888
+
LAPTM4B
chr8
97775057
97853013
+
LARGE1
chr22
33162226
33922841
-
MTOR
chr1
11106535
11262551
-
PTMA
chr2
231706895
231713541
+
RPL18A
chr19
17859910
17864153
+
TPI1
chr12
6867119
6870948
+
TSPAN4
chr11
842812
867116
+
TUBB
chr6
30720352
30725426
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA