Entry Detail


General Information

Database ID:exR0390692
RNA Name:ADAMTS13
RNA Type:mRNA
Chromosome:chr9
Starnd:+
Coordinate:
Start Site(bp):133414358End Site(bp):133459402
External Links:ENSG00000160323



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ATXN10
chr22
45671798
45845307
+
BCR
chr22
23179704
23318037
+
CCDC124
chr19
17933015
17943991
+
DDX24
chr14
94048287
94081212
-
EME2
chr16
1772810
1781708
+
ESYT1
chr12
56118250
56144671
+
GCN1
chr12
120127202
120194715
-
GDI2
chr10
5765223
5842132
-
GNS
chr12
64713445
64759431
-
LUC7L
chr16
188969
229463
-
MAPK9
chr5
180233143
180292099
-
MARCKSL1
chr1
32333839
32336233
-
NDUFV1
chr11
67605653
67612554
+
PDXK
chr21
43719094
43762307
+
PLEKHJ1
chr19
2230084
2237704
-
PPP2R1A
chr19
52190048
52229518
+
PTOV1
chr19
49850735
49860744
+
PTPN11
chr12
112418351
112509913
+
SPG11
chr15
44562696
44663678
-
SPG7
chr16
89490719
89557768
+
SUV39H1
chrX
48695554
48709012
+
WDR34
chr9
128633661
128656787
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC121761.1
chr12
75483454
75489820
-
AC124068.2
chr15
89335053
89336161
+
Z95331.1
chr22
45657019
45680130
+
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA