Entry Detail


General Information

Database ID:exR0390696
RNA Name:ADAMTS17
RNA Type:mRNA
Chromosome:chr15
Starnd:-
Coordinate:
Start Site(bp):99971437End Site(bp):100342005
External Links:ENSG00000140470



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC022384.1
chr3
10249372
10285796
+
ATXN7L3
chr17
44191805
44200113
-
BRD4
chr19
15235519
15332545
-
E2F2
chr1
23506438
23531233
-
EIF4G3
chr1
20806292
21176888
-
ERCC1
chr19
45407333
45478828
-
FUBP3
chr9
130578965
130638352
+
LAMA3
chr18
23689443
23956222
+
LAMA5
chr20
62307955
62367312
-
MAP1B
chr5
72107234
72209565
+
NCOR1
chr17
16029157
16218185
-
PKN1
chr19
14433053
14471867
+
PTPRU
chr1
29236516
29326813
+
SELENOS
chr15
101270817
101277500
-
TATDN2
chr3
10248023
10281218
+
TICRR
chr15
89575469
89631056
+
TMEM151B
chr6
44270450
44307506
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA