Entry Detail


General Information

Database ID:exR0390698
RNA Name:ADAMTS19
RNA Type:mRNA
Chromosome:chr5
Starnd:+
Coordinate:
Start Site(bp):129460281End Site(bp):129738683
External Links:ENSG00000145808



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
RIT1
chr1
155897808
155911404
-
NSFL1C
chr20
1442162
1473842
-
SCFD2
chr4
52872982
53366066
-
RPL23A
chr17
28719985
28724359
+
TPT1
chr13
45333471
45341370
-
GRK5
chr10
119207571
119459745
+
GPR137C
chr14
52552836
52637713
+
SMPD2
chr6
109440724
109443919
+
FAM124A
chr13
51222334
51284241
+
TSPAN6
chrX
100627108
100639991
-
ZNF614
chr19
52012765
52030240
-
EIF2D
chr1
206571292
206612465
-
GATA5
chr20
62463497
62475995
-
CCZ1
chr7
5898725
5926550
+
BZW1
chr2
200810594
200827338
+
RPL3
chr22
39312882
39320389
-
SYPL1
chr7
106090503
106112576
-
BTAF1
chr10
91923770
92030325
+
XPO6
chr16
28097979
28211920
-
STX8
chr17
9250471
9576591
-
HNRNPH3
chr10
68331174
68343191
+
KHDRBS1
chr1
32013868
32060850
+
RARB
chr3
25174332
25597932
+
FBXL19
chr16
30923055
30948783
+
TPR
chr1
186311652
186375693
-
ATXN10
chr22
45671798
45845307
+
SLC38A1
chr12
46183063
46270017
-
NRAS
chr1
114704469
114716771
-
FLNA
chrX
154348524
154374638
-
DDOST
chr1
20651767
20661544
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA