Entry Detail


General Information

Database ID:exR0390699
RNA Name:ADAMTS2
RNA Type:mRNA
Chromosome:chr5
Starnd:-
Coordinate:
Start Site(bp):179110853End Site(bp):179345461
External Links:ENSG00000087116



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
BLOC1S5-TXNDC5
chr6
7881522
8064364
-
DHRS11
chr17
36591879
36600804
+
ECI1
chr16
2239402
2252300
-
GYG1
chr3
148991341
149027668
+
IGF2
chr11
2129112
2141238
-
INS-IGF2
chr11
2132538
2161209
-
KHDRBS1
chr1
32013868
32060850
+
MARCKSL1
chr1
32333839
32336233
-
PAFAH1B3
chr19
42297033
42303546
-
TOP2A
chr17
40388525
40417896
-
TXNDC5
chr6
7881517
7910788
-
ZNF703
chr8
37695782
37700019
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
LINC00910
chr17
43338741
43389199
-
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA