Entry Detail


General Information

Database ID:exR0390885
RNA Name:AKAP5
RNA Type:mRNA
Chromosome:chr14
Starnd:+
Coordinate:
Start Site(bp):64465499End Site(bp):64474503
External Links:ENSG00000179841



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010463.1
chr19
17267418
17282966
+
AC023055.1
chr12
55757275
55827546
-
BABAM1
chr19
17267376
17281249
+
CNPY3
chr6
42929192
42939294
+
EIF3I
chr1
32221928
32231604
+
GNB1
chr1
1785285
1891117
-
PPP2R1B
chr11
111726908
111766389
-
PSMB5
chr14
23016543
23035230
-
RPS16
chr19
39433137
39435949
-
RPS3
chr11
75399515
75422280
+
SARNP
chr12
55752463
55817724
-
ZNF141
chr4
337814
384868
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA