Entry Detail


General Information

Database ID:exR0391957
RNA Name:BRWD1
RNA Type:mRNA
Chromosome:chr21
Starnd:-
Coordinate:
Start Site(bp):39184176End Site(bp):39321559
External Links:ENSG00000185658



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCB10
chr1
229516582
229558707
-
AC008982.1
chr19
38817471
38840178
-
AC010422.3
chr19
12643831
12648397
-
AC026954.2
chr17
7312661
7319174
-
AC068946.2
chr2
219209772
219222738
-
AC104452.1
chr3
49416777
49429314
-
ADCY9
chr16
3953387
4116442
-
ADGRG6
chr6
142301854
142446266
+
ADORA2A
chr22
24417879
24442357
+
ADPRHL2
chr1
36088892
36093932
+
AGAP3
chr7
151085831
151144436
+
AGO2
chr8
140520156
140635633
-
AL136295.1
chr14
24189157
24213473
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-19a-3p
chr13
91350939
91350961
+
hsa-miR-23b-3p
chr9
95085265
95085287
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC012146.1
chr17
5111468
5115004
+
AC016876.2
chr17
7581964
7584086
-
AC018521.1
chr17
47945424
47981736
+
AC067930.1
chr8
143579636
143580670
+
AD000090.1
chr19
35557956
35581954
+
AL096870.2
chr14
24209646
24215987
-
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA