Entry Detail


General Information

Database ID:exR0395662
RNA Name:FKBP8
RNA Type:mRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):18531751End Site(bp):18544077
External Links:ENSG00000105701



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE64951
Description:Discovered salivary transcriptomic biomarkers for the detection of gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Normal
Number of Case:63
Number of Control:31
Number of Samples:94





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCA5
chr17
69244311
69327244
-
ABCC4
chr13
95019835
95301475
-
ABR
chr17
1003518
1229738
-
AC007192.1
chr19
18153158
18178117
+
AC008878.3
chr19
7382834
7470241
+
AC010132.3
chr7
42909273
42932174
-
AC012184.2
chr16
70299194
70372582
+
AC024592.3
chr19
5866171
5903787
-
AC055811.2
chr17
17202649
17237185
-
AC073896.1
chr12
56285916
56316059
-
AC138811.2
chr16
18788063
18801519
-
ACAT2
chr6
159762045
159779112
+
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTR1A
chr10
102461881
102502712
-
ADCK5
chr8
144373101
144393242
+
ADGRE2
chr19
14732392
14778560
-
ADGRL1
chr19
14147743
14206187
-
ADO
chr10
62804720
62808479
+
AEN
chr15
88621337
88632281
+
AFDN
chr6
167826922
167972023
+
AGPAT3
chr21
43865223
43987592
+
AHCTF1
chr1
246839098
246931967
-
AIFM1
chrX
130129362
130165887
-
AKAP10
chr17
19904302
19978343
-
AKNA
chr9
114334156
114394405
-
AL365205.1
chr6
41780349
41790141
+
AL603832.3
chr1
112702614
112711433
-
ALCAM
chr3
105366909
105576900
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3652
chr12
103930425
103930442
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005899.4
chr17
32328441
32329395
+
AC010615.2
chr19
21444241
21463908
-
AC026362.1
chr12
122975320
122982907
+
AC069281.2
chr7
100572232
100578700
-
AC074183.1
chr7
84939349
84940245
-
AC099778.1
chr3
47379089
47380999
-
AC106864.1
chr4
112693047
112706810
-
AC109460.3
chr16
28974804
28990775
+
AC113189.2
chr17
7420103
7444081
+
AC113189.4
chr17
7439506
7445966
+
AC245014.3
chr1
145281116
145281462
+
Display:



Experiment Detail

GEO ID:GSE64951
Sample Source:Saliva
Source Fraction:Supernatant
Platform:GPL570
Method:Microarray
Num of detected RNA Type:1
Num of detected RNAs of this Type:17063
Sample treatment protocol:Saliva was spun down to collect cell-free saliva supernatant.
RNA Extract protocol:Total RNA was extracted by using Qiagen Rneasy kit.
RNA library preparation protocol:Standard Affymetrix protocol.



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA