exRNAdisease

Entry Detail

---



General Information

Database ID: exR0411125 RNA Name: EPB41L4A-AS1 RNA Type: lncRNA Chromosome: chr5 Starnd: + Coordinate: Start Site(bp): 112160526 End Site(bp): 112164818 External Links: ENSG00000224032

Disease Information

Disease Name: Gastric Cancer Disease Category: Cancers MeSH ID: D013274 Type: Neoplasms/Digestive System Neoplasms Alias: Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse

Expression Detail

GEO ID: GSE121870 Description: Identifying novel small RNA biomarkers unique to patients with gastric cancer Experimental Design: Cancer vs Control Case Disease Type: Gastric Cancer Case Disease SubType: NA Case Sample: Gastric Cancer Control Sample: Healthy Number of Case: 98 Number of Control: 100 Number of Samples: 198

Regulatory Relationship

mRNA targets: Gene Symbol Chromosome Start Site(bp) End Site(bp) Strand AC007192.1 chr19 18153158 18178117 + AC120057.2 chr17 7240427 7244635 - ACTB chr7 5527148 5563784 - ACTG1 chr17 81509971 81523847 - AGRN chr1 1020120 1056118 + AC118553.2 chr1 99970011 100083321 + miRNA targets: miRNA Symbol Chromosome Start Site(bp) End Site(bp) Strand hsa-miR-17-5p chr13 91350618 91350640 + hsa-miR-20a-5p chr13 91351072 91351094 + hsa-miR-93-5p chr7 100093815 100093837 - hsa-miR-105-5p chrX 152394458 152394480 - hsa-miR-106a-5p chrX 134170244 134170266 - hsa-miR-214-3p chr1 172138816 172138837 - hsa-miR-142-5p chr17 58331283 58331303 - hsa-miR-106b-5p chr7 100094043 100094063 - hsa-miR-20b-5p chrX 134169850 134169872 - hsa-miR-519c-3p chr19 53686522 53686543 + hsa-miR-526b-3p chr19 53694443 53694464 + hsa-miR-519b-3p chr19 53695263 53695284 + hsa-miR-519d-3p chr19 53713400 53713421 + hsa-miR-520g-3p chr19 53722220 53722243 + hsa-miR-520h chr19 53742566 53742587 + hsa-miR-519a-3p chr19 53762397 53762418 + hsa-miR-761 chr1 51836375 51836396 - hsa-miR-3619-5p chr22 46091059 46091080 + hsa-miR-5590-3p chr2 134857853 134857873 + hsa-miR-1277-5p chrX 118386401 118386424 + hsa-miR-511-3p chr10 17845160 17845179 + hsa-miR-7853-5p chr6 6169380 6169400 - circRNA targets: NA lncRNA targets: NA Display:

Experiment Detail

GEO ID: NA Sample Source: NA Source Fraction: NA Platform: NA Method: NA Num of detected RNA Type: NA Num of detected RNAs of this Type: NA Sample treatment protocol: NA RNA Extract protocol: NA RNA library preparation protocol: NA

Reference

PMID: NA Title: NA Author: NA Journal: NA Description: NA