Entry Detail


General Information

Database ID:exR0411355
RNA Name:LINC00665
RNA Type:lncRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):36313067End Site(bp):36331770
External Links:ENSG00000232677



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AGPAT3
chr21
43865223
43987592
+
ADCY1
chr7
45574140
45723116
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-34a-5p
chr1
9151735
9151756
-
hsa-miR-214-3p
chr1
172138816
172138837
-
hsa-miR-224-5p
chrX
151958628
151958652
-
hsa-miR-34c-5p
chr11
111513451
111513473
+
hsa-miR-449a
chr5
55170586
55170607
-
hsa-miR-449b-5p
chr5
55170706
55170727
-
hsa-miR-542-3p
chrX
134541364
134541385
-
hsa-miR-665
chr14
100875075
100875094
+
hsa-miR-761
chr1
51836375
51836396
-
hsa-miR-3179
chr16
18411905
18411926
-
hsa-miR-3619-5p
chr22
46091059
46091080
+
hsa-miR-642b-3p
chr19
45674941
45674962
-
hsa-miR-642a-3p
chr19
45674978
45674999
+
hsa-miR-873-3p
chr9
28888889
28888910
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC020928.1
chr19
36773112
36777078
+
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA