Entry Detail


General Information

Database ID:exR0411535
RNA Name:SNHG6
RNA Type:lncRNA
Chromosome:chr8
Starnd:-
Coordinate:
Start Site(bp):66921684End Site(bp):66926398
External Links:ENSG00000245910



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010323.1
chr19
8308283
8321379
-
AC010422.3
chr19
12643831
12648397
-
AC010463.1
chr19
17267418
17282966
+
ACTB
chr7
5527148
5563784
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-26a-5p
chr3
37969413
37969434
+
hsa-miR-26b-5p
chr2
218402657
218402677
+
hsa-miR-101-3p
chr1
65058442
65058462
-
hsa-miR-485-3p
chr14
101055464
101055485
+
hsa-miR-944
chr3
189829975
189829996
+
hsa-miR-1297
chr13
54311981
54311997
-
hsa-miR-1278
chr1
193136552
193136573
+
hsa-miR-3924
chr10
57304489
57304510
-
hsa-miR-4465
chr6
140683855
140683876
+
hsa-miR-539-3p
chr14
101047369
101047390
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC021078.1
chr5
149494314
149504670
-
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA