Entry Detail


General Information

Database ID:exR0411536
RNA Name:SNHG8
RNA Type:lncRNA
Chromosome:chr4
Starnd:+
Coordinate:
Start Site(bp):118278709End Site(bp):118285316
External Links:ENSG00000269893



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC048338.1
chr12
122207779
122266423
-
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
AFG1L
chr6
108294991
108526796
+
ALDOA
chr16
30064164
30070457
+
AC024592.3
chr19
5866171
5903787
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-149-5p
chr2
240456015
240456037
+
hsa-miR-154-5p
chr14
101059769
101059790
+
hsa-miR-384
chrX
76919285
76919304
-
hsa-miR-494-3p
chr14
101029681
101029702
+
hsa-miR-522-3p
chr19
53751264
53751285
+
hsa-miR-588
chr6
126484646
126484666
+
hsa-miR-620
chr12
116148575
116148594
-
hsa-miR-411-5p
chr14
101023340
101023360
+
hsa-miR-656-3p
chr14
101066766
101066786
+
hsa-miR-542-3p
chrX
134541364
134541385
-
hsa-miR-425-5p
chr3
49020199
49020221
-
hsa-miR-371a-5p
chr19
53787680
53787699
+
hsa-miR-1270
chr19
20399320
20399342
-
hsa-miR-224-3p
chrX
151958584
151958606
-
hsa-miR-4701-5p
chr12
48772014
48772035
-
hsa-miR-506-5p
chrX
147230788
147230809
-
hsa-miR-873-3p
chr9
28888889
28888910
-
hsa-miR-7151-5p
chr10
67403388
67403410
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007952.4
chr17
19112000
19112636
-
AC068205.2
chr11
43578889
43840030
+
AC139149.1
chr17
81514047
81527776
+
AL133215.2
chr10
101060029
101061005
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA