Entry Detail


General Information

Database ID:exR0411779
RNA Name:ACTA1
RNA Type:mRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):229431245End Site(bp):229434098
External Links:ENSG00000143632



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
PRMT2
chr21
46635595
46665124
+
ACTR1B
chr2
97655939
97664044
-
SLC38A10
chr17
81244811
81295547
-
SNRPB2
chr20
16729961
16742564
+
AL136454.1
chr1
192716132
192716653
+
TARDBP
chr1
11012344
11026420
+
EIF5A
chr17
7306999
7312463
+
ATP5PD
chr17
75038863
75046985
-
LIX1L
chr1
145933423
145958017
-
SLC25A3
chr12
98593591
98606379
+
FTL
chr19
48965309
48966879
+
RPL28
chr19
55385345
55403250
+
POTEJ
chr2
130611481
130658091
+
AGGF1
chr5
77029251
77065234
+
MCM2
chr3
127598410
127622436
+
ERGIC3
chr20
35542021
35557634
+
HEXA
chr15
72340919
72376476
-
UBE4B
chr1
10032832
10181239
+
ACTC1
chr15
34790230
34795549
-
RPL23
chr17
38847860
38853764
-
SEC61G
chr7
54752250
54759974
-
MRPS27
chr5
72219409
72320646
-
RPL11
chr1
23691742
23696835
+
RNPEP
chr1
201982372
202006147
+
PFN1
chr17
4945652
4949061
-
PPIA
chr7
44796680
44824564
+
RPL36
chr19
5674947
5691875
+
POLR3C
chr1
145824088
145844402
+
TNIP1
chr5
151029945
151093577
-
CDC42SE1
chr1
151050971
151070325
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-4426
chr1
192716333
192716349
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AL022311.1
chr22
37876148
37895563
+
AL355472.2
chr1
234357006
234365828
+
AL359924.1
chr1
237862175
237928321
+
LINC00847
chr5
180830326
180839742
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA