Entry Detail


General Information

Database ID:exR0411780
RNA Name:ACTA2
RNA Type:mRNA
Chromosome:chr10
Starnd:-
Coordinate:
Start Site(bp):88935074End Site(bp):88991339
External Links:ENSG00000107796



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ZNF516
chr18
76357682
76495242
-
HNRNPDL
chr4
82422564
82430408
-
RPS16
chr19
39433137
39435949
-
HLA-B
chr6
31269491
31357188
-
ATP5F1B
chr12
56638175
56645984
-
TMSB4X
chrX
12975110
12977227
+
HLA-A
chr6
29941260
29945884
+
POTEF
chr2
130073535
130129222
-
GCN1
chr12
120127202
120194715
-
HNRNPH3
chr10
68331174
68343191
+
TRAP1
chr16
3651639
3717553
-
ATP5PB
chr1
111448864
111462773
+
PWWP2B
chr10
132397168
132417859
+
PHF23
chr17
7235029
7239722
-
HLA-DMA
chr6
32948613
32969094
-
RPS8
chr1
44775251
44778779
+
PEX2
chr8
76980258
77001044
-
BAIAP2L1
chr7
98291650
98401090
-
CLUH
chr17
2689386
2712663
-
UQCRC1
chr3
48599002
48610976
-
CCT7
chr2
73233420
73253021
+
HLA-DQA1
chr6
32628179
32647062
+
ACTG1
chr17
81509971
81523847
-
CNBP
chr3
129169484
129183922
-
PTTG1
chr5
160421855
160428739
+
ATN1
chr12
6924463
6942321
+
DDIT4
chr10
72273924
72276036
+
POLN
chr4
2071918
2242121
-
RAB12
chr18
8609437
8639382
+
RARA
chr17
40309180
40357643
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC139149.1
chr17
81514047
81527776
+
AC013269.1
chr2
130530275
130537182
+
MALAT1
chr11
65497688
65506516
+
NEAT1
chr11
65422774
65445540
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA