Entry Detail


General Information

Database ID:exR0411949
RNA Name:AFTPH
RNA Type:mRNA
Chromosome:chr2
Starnd:+
Coordinate:
Start Site(bp):64524305End Site(bp):64593005
External Links:ENSG00000119844



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
BID
chr22
17734138
17774770
-
YWHAQ
chr2
9583967
9630997
-
CLEC2D
chr12
9664969
9699553
+
NAP1L1
chr12
76036585
76084958
-
DTYMK
chr2
241675747
241686944
-
TWSG1
chr18
9334767
9402420
+
TUBA1B
chr12
49127782
49131397
-
LAMC1
chr1
183023420
183145592
+
BIRC2
chr11
102347211
102378670
+
CUL3
chr2
224470150
224585397
-
PGK1
chrX
77910739
78129295
+
HLA-A
chr6
29941260
29945884
+
HEXA
chr15
72340919
72376476
-
STRN4
chr19
46719511
46746994
-
RPUSD4
chr11
126202096
126211692
-
HLA-F
chr6
29722775
29738528
+
BRPF3
chr6
36196744
36232790
+
CD48
chr1
160678746
160711831
-
ATP5MG
chr11
118401606
118431496
+
LCP1
chr13
46125920
46211871
-
ATP8B2
chr1
154325553
154351304
+
NCL
chr2
231453531
231483641
-
AKIRIN2
chr6
87674860
87702233
-
HNRNPU
chr1
244840638
244864560
-
HDAC2
chr6
113933028
114011308
-
PHF20
chr20
35771974
35950370
+
RPL32
chr3
12834485
12841582
-
MRPL4
chr19
10251901
10260055
+
RPL27
chr17
42998273
43002959
+
YWHAH
chr22
31944522
31957603
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
LINC01405
chr12
110934590
110959093
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA