Entry Detail


General Information

Database ID:exR0411954
RNA Name:AGAP4
RNA Type:mRNA
Chromosome:chr10
Starnd:-
Coordinate:
Start Site(bp):45825594End Site(bp):45853875
External Links:ENSG00000188234



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AGAP1
chr2
235494043
236131800
+
AGAP5
chr10
73674285
73698159
-
AGAP6
chr10
49982190
50010499
+
AGAP9
chr10
47501854
47523638
-
BMS1
chr10
42782795
42834937
+
BSG
chr19
571277
583493
+
CCT3
chr1
156308968
156367873
-
CDC42
chr1
22025511
22101360
+
CNBP
chr3
129169484
129183922
-
FASN
chr17
82078338
82098294
-
FZD9
chr7
73433778
73436120
+
HYPK
chr15
43796142
43803043
+
KIAA1522
chr1
32741830
32774970
+
MATR3
chr5
139273752
139331671
+
NONO
chrX
71283192
71301168
+
PHF3
chr6
63635820
63779336
+
RPL37
chr5
40825262
40835222
-
RPS2
chr16
1962058
1964841
-
RPS9
chr19
54200809
54249003
+
SERF2
chr15
43777087
43802589
+
TSR1
chr17
2322396
2336657
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC022400.3
chr10
73674295
73730466
-
AGAP11
chr10
86970741
87010126
+
AL136982.1
chr10
86992406
87010203
+
AC135983.2
chr15
32398956
32435233
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA