Entry Detail


General Information

Database ID:exR0411966
RNA Name:AGGF1
RNA Type:mRNA
Chromosome:chr5
Starnd:+
Coordinate:
Start Site(bp):77029251End Site(bp):77065234
External Links:ENSG00000164252



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ASPM
chr1
197084127
197146694
-
RPL27A
chr11
8682788
8714759
+
PGK1
chrX
77910739
78129295
+
TUBA1B
chr12
49127782
49131397
-
EIF5A
chr17
7306999
7312463
+
FP565260.6
chr21
5155499
5165472
-
MYL6
chr12
56158161
56163496
+
FP565260.2
chr21
5116343
5133805
-
ESRP1
chr8
94641074
94707466
+
SUB1
chr5
32531633
32604079
+
BZW2
chr7
16646131
16706523
+
ACTA1
chr1
229431245
229434098
-
B2M
chr15
44711487
44718877
+
NEDD4L
chr18
58044226
58401540
+
HLA-A
chr6
29941260
29945884
+
MARCKSL1
chr1
32333839
32336233
-
RPS9
chr19
54200809
54249003
+
AC008581.2
chr5
77030902
77152155
+
KIFC3
chr16
57758217
57863053
-
SMC4
chr3
160399274
160434954
+
PRRC1
chr5
127517609
127555089
+
TCEAL4
chrX
103576231
103587736
+
PPP2R5B
chr11
64917553
64934475
+
ERAL1
chr17
28855010
28861061
+
PBX1
chr1
164555584
164899296
+
ID1
chr20
31605283
31606515
+
CCPG1
chr15
55340032
55408510
-
RPL23A
chr17
28719985
28724359
+
ACTN1
chr14
68874143
68979440
-
MIF
chr22
23894383
23895227
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
FGD5-AS1
chr3
14920347
14948424
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA