Entry Detail


General Information

Database ID:exR0411971
RNA Name:AGO1
RNA Type:mRNA
Chromosome:chr1
Starnd:+
Coordinate:
Start Site(bp):35869808End Site(bp):35930532
External Links:ENSG00000092847



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
MT-ND4L
chrMT
10470
10766
+
ESPL1
chr12
53268299
53293638
+
SAMD4B
chr19
39342396
39385710
+
CANX
chr5
179678628
179731641
+
NFATC2IP
chr16
28950807
28967097
+
LAMTOR1
chr11
72085895
72103297
-
PSMD2
chr3
184299198
184309050
+
AP1B1
chr22
29327680
29423179
-
PJA2
chr5
109334713
109409974
-
KDM4B
chr19
4969113
5153598
+
REC8
chr14
24171853
24180257
+
PTMA
chr2
231706895
231713541
+
HLA-A
chr6
29941260
29945884
+
FTO
chr16
53701692
54158512
+
KRIT1
chr7
92198969
92246166
-
DNMBP
chr10
99875577
100009947
-
AP002990.1
chr11
62559603
62591531
-
RPL36AL
chr14
49618530
49620626
-
SMS
chrX
21940709
21994837
+
SPINT2
chr19
38244035
38292615
+
KLHL36
chr16
84648511
84667686
+
PANX1
chr11
94128841
94181968
+
CALM1
chr14
90396502
90408268
+
PRPF40A
chr2
152651593
152717997
-
AGO2
chr8
140520156
140635633
-
NEURL4
chr17
7315628
7329393
-
RPL32
chr3
12834485
12841582
-
RPL8
chr8
144789765
144792587
-
LCOR
chr10
96832282
96995959
+
SND1
chr7
127652194
128092609
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC023509.1
chr12
53441741
53467528
+
AC007347.1
chr16
54033997
54054583
-
AC022034.3
chr8
53394110
53484067
-
LINC01641
chr1
227393554
227431035
+
TUG1
chr22
30969245
30979395
+
XIST
chrX
73820649
73852723
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA