Entry Detail


General Information

Database ID:exR0411986
RNA Name:AGTPBP1
RNA Type:mRNA
Chromosome:chr9
Starnd:-
Coordinate:
Start Site(bp):85546539End Site(bp):85742029
External Links:ENSG00000135049



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
COL5A1
chr9
134641803
134844843
+
EEF2
chr19
3976056
3985463
-
EPOP
chr17
38671703
38674957
-
CCDC88C
chr14
91271323
91417844
-
TADA2B
chr4
7041899
7057952
+
HNRNPK
chr9
83968083
83980616
-
RPS27A
chr2
55231903
55235853
+
PSMD3
chr17
39980807
39997959
+
VAMP3
chr1
7771296
7781432
+
GPRC5B
chr16
19856691
19886167
-
CCDC189
chr16
30757423
30762221
-
CCAR2
chr8
22604632
22621514
+
CAND2
chr3
12796472
12871916
+
DNAJB6
chr7
157335381
157417439
+
TPT1
chr13
45333471
45341370
-
METTL7A
chr12
50923472
50932510
+
PLXNA3
chrX
154458281
154477779
+
SMARCD1
chr12
50085200
50100707
+
ST13
chr22
40824535
40856639
-
U2SURP
chr3
142964497
143060725
+
ZNF234
chr19
44141554
44160313
+
ABHD14B
chr3
51968510
51983409
-
TYMS
chr18
657653
673578
+
GATAD2B
chr1
153789030
153923360
-
STAT1
chr2
190908460
191020960
-
RANBP1
chr22
20115938
20127355
+
VTI1B
chr14
67647085
67674820
-
IRF4
chr6
391752
411443
+
C1orf210
chr1
43281877
43285617
-
CALM3
chr19
46601074
46610782
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
PDCD4-AS1
chr10
110869868
110872233
-
ZFAS1
chr20
49278178
49299600
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA