Entry Detail



General Information

Database ID:exR0412019
RNA Name:AJUBA
RNA Type:mRNA
Chromosome:chr14
Starnd:-
Coordinate:
Start Site(bp):22971177End Site(bp):22982551
External Links:ENSG00000129474



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
RXRA
chr9
134317098
134440585
+
RACK1
chr5
181236897
181248096
-
ARL6IP4
chr12
122980060
122982913
+
SORL1
chr11
121452314
121633763
+
PISD
chr22
31618491
31662432
-
LDHA
chr11
18394560
18408425
+
TUBA1A
chr12
49184795
49189080
-
B2M
chr15
44711487
44718877
+
SUGP2
chr19
18990888
19034023
-
HNRNPC
chr14
21209136
21269494
-
AC003006.1
chr19
57682045
57753575
+
IFITM3
chr11
319676
327537
-
VDAC1
chr5
133971871
134004975
-
TPT1
chr13
45333471
45341370
-
CACNG8
chr19
53963040
53990215
+
HMGA1
chr6
34236873
34246231
+
RAVER1
chr19
10316212
10333638
-
PSMD10
chrX
108084207
108091549
-
CNBP
chr3
129169484
129183922
-
CAPZA2
chr7
116811070
116922049
+
SHMT1
chr17
18327860
18363563
-
VPS4A
chr16
69311350
69326939
+
CMTM6
chr3
32481312
32502852
-
GAPDH
chr12
6534512
6538374
+
ZNF551
chr19
57681969
57717301
+
TRNP1
chr1
26993692
27000886
+
CPNE1
chr20
35626031
35664956
-
RPL13A
chr19
49487554
49492308
+
HIGD2A
chr5
176388751
176389761
+
DDB1
chr11
61299451
61342596
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC026362.1
chr12
122975320
122982907
+
AC079949.1
chr12
127142029
127146532
-
AP003392.4
chr11
119065263
119065677
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA