Entry Detail


General Information

Database ID:exR0412042
RNA Name:AKIP1
RNA Type:mRNA
Chromosome:chr11
Starnd:+
Coordinate:
Start Site(bp):8911139End Site(bp):8920084
External Links:ENSG00000166452



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
CBX3
chr7
26201162
26213607
+
FSCN1
chr7
5592816
5606655
+
MDM2
chr12
68808177
68850686
+
OAS3
chr12
112938444
112973251
+
COPS7B
chr2
231781671
231809254
+
EIF1
chr17
41688885
41692668
+
MRPL49
chr11
65122183
65127371
+
SLC2A1
chr1
42925375
42958868
-
B2M
chr15
44711487
44718877
+
NIPSNAP1
chr22
29554808
29581327
-
AK4
chr1
65147549
65232145
+
SLC25A6
chrX
1386152
1392113
-
DHX15
chr4
24517441
24584554
-
VLDLR
chr9
2621787
2660056
+
AL136454.1
chr1
192716132
192716653
+
TXNL1
chr18
56597209
56651600
-
CHKB-CPT1B
chr22
50568869
50582965
-
KRT7
chr12
52232520
52252186
+
TAGLN2
chr1
159918107
159925732
-
CHMP1A
chr16
89644435
89657721
-
FP565260.6
chr21
5155499
5165472
-
FP565260.2
chr21
5116343
5133805
-
OST4
chr2
27070472
27071654
-
TSTD2
chr9
97600080
97633368
-
PSMA5
chr1
109399042
109426448
-
PPP2R1A
chr19
52190048
52229518
+
IL21R
chr16
27402174
27452042
+
THOC5
chr22
29505879
29555216
-
GPSM3
chr6
32190766
32195523
-
MAT2A
chr2
85539168
85545281
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-4426
chr1
192716333
192716349
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
DANCR
chr4
52712404
52720351
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA