Entry Detail


General Information

Database ID:exR0414071
RNA Name:CDK6
RNA Type:mRNA
Chromosome:chr7
Starnd:-
Coordinate:
Start Site(bp):92604921End Site(bp):92836594
External Links:ENSG00000105810



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010422.3
chr19
12643831
12648397
-
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-17-5p
chr13
91350618
91350640
+
hsa-miR-106a-5p
chrX
134170244
134170266
-
hsa-miR-143-3p
chr5
149428978
149428998
+
hsa-miR-302b-3p
chr4
112648489
112648511
-
hsa-miR-302c-3p
chr4
112648366
112648388
-
hsa-miR-302d-3p
chr4
112648006
112648028
-
hsa-miR-371a-3p
chr19
53787716
53787738
+
hsa-miR-373-3p
chr19
53788748
53788770
+
hsa-miR-20b-5p
chrX
134169850
134169872
-
hsa-miR-520a-3p
chr19
53690933
53690954
+
hsa-miR-519b-3p
chr19
53695263
53695284
+
hsa-miR-520d-3p
chr19
53720149
53720170
+
hsa-miR-519a-3p
chr19
53762397
53762418
+
hsa-miR-140-3p
chr16
69933142
69933162
+
hsa-miR-1323
chr19
53671978
53671999
+
hsa-miR-548o-3p
chr20
38516607
38516628
+
hsa-miR-1270
chr19
20399320
20399342
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC073342.1
chr7
143255264
143287997
-
AC092720.1
chr16
87595131
87600337
+
AC245014.3
chr1
145281116
145281462
+
AL021707.2
chr22
38667585
38681847
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA