Entry Detail


General Information

Database ID:exR0414632
RNA Name:COL4A2
RNA Type:mRNA
Chromosome:chr13
Starnd:+
Coordinate:
Start Site(bp):110305812End Site(bp):110513209
External Links:ENSG00000134871



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABHD10
chr3
111979010
111993368
+
ACIN1
chr14
23058564
23095614
-
ADNP2
chr18
80109262
80147523
+
AF241726.2
chrX
37349330
38687674
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-199a-5p
chr1
172144592
172144614
-
hsa-miR-199b-5p
chr9
128244783
128244805
-
hsa-miR-140-5p
chr16
69933103
69933124
+
hsa-miR-302a-3p
chr4
112648186
112648208
-
hsa-miR-34c-5p
chr11
111513451
111513473
+
hsa-miR-299-3p
chr14
101023832
101023853
+
hsa-miR-302d-3p
chr4
112648006
112648028
-
hsa-miR-491-5p
chr9
20716120
20716141
+
hsa-miR-519c-5p
chr19
53686484
53686505
+
hsa-miR-520a-3p
chr19
53690933
53690954
+
hsa-miR-526a-5p
chr19
53726928
53726949
+
hsa-miR-519b-5p
chr19
53695225
53695246
+
hsa-miR-520c-5p
chr19
53707468
53707489
+
hsa-miR-518d-5p
chr19
53734892
53734913
+
hsa-miR-302e
chr11
7234771
7234787
+
hsa-miR-6850-5p
chr8
144791970
144791991
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC009088.1
chr16
31196131
31196963
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA