Entry Detail


General Information

Database ID:exR0417057
RNA Name:GATAD2B
RNA Type:mRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):153789030End Site(bp):153923360
External Links:ENSG00000143614



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC012309.1
chr19
37093019
37210512
-
AC048338.1
chr12
122207779
122266423
-
AC116366.3
chr5
132410832
132646079
+
ACACB
chr12
109116595
109268226
+
AGTPBP1
chr9
85546539
85742029
-
AKT1S1
chr19
49869033
49878459
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-23a-3p
chr19
13836595
13836615
-
hsa-miR-29a-3p
chr7
130876748
130876769
-
hsa-miR-23b-3p
chr9
95085265
95085287
+
hsa-miR-185-5p
chr22
20033153
20033174
+
hsa-miR-29c-3p
chr1
207801865
207801886
-
hsa-miR-34c-5p
chr11
111513451
111513473
+
hsa-miR-449a
chr5
55170586
55170607
-
hsa-miR-641
chr19
40282603
40282626
-
hsa-miR-663a
chr20
26208243
26208264
-
hsa-miR-449b-5p
chr5
55170706
55170727
-
hsa-miR-483-5p
chr11
2134181
2134202
-
hsa-miR-1321
chrX
85835832
85835849
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004834.1
chr7
99252452
99325826
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA