Entry Detail


General Information

Database ID:exR0427513
RNA Name:VPS4A
RNA Type:mRNA
Chromosome:chr16
Starnd:+
Coordinate:
Start Site(bp):69311350End Site(bp):69326939
External Links:ENSG00000132612



Disease Information

Disease Name:Gastric Cancer
Disease Category:Cancers
MeSH ID:D013274
Type:Neoplasms/Digestive System Neoplasms
Alias:Stomach Neoplasms//Neoplasm, Stomach//Stomach Neoplasm//Neoplasms, Stomach//Gastric Neoplasms//Gastric Neoplasm//Neoplasm, Gastric//Neoplasms, Gastric//Cancer of Stomach//Stomach Cancers//Gastric Cancer//Cancer, Gastric//Cancers, Gastric//Gastric Cancers//Stomach Cancer//Cancer, Stomach//Cancers, Stomach//Cancer of the Stomach//Gastric Cancer, Familial Diffuse



Expression Detail

GEO ID:GSE121870
Description:Identifying novel small RNA biomarkers unique to patients with gastric cancer
Experimental Design:Cancer vs Control
Case Disease Type:Gastric Cancer
Case Disease SubType:NA
Case Sample:Gastric Cancer
Control Sample:Healthy
Number of Case:98
Number of Control:100
Number of Samples:198





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCC6
chr16
16148928
16223522
-
AC008575.1
chr5
112827213
112867582
+
AC020915.5
chr19
58228914
58315183
+
AC026464.4
chr16
69299682
69322700
+
AC120057.2
chr17
7240427
7244635
-
ACOT7
chr1
6264269
6394391
-
ADAMTSL4
chr1
150549369
150560937
+
AGFG2
chr7
100539203
100568220
+
AJUBA
chr14
22971177
22982551
-
AKAP17A
chrX
1591604
1602520
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-7-5p
chr19
4770700
4770723
+
hsa-miR-185-5p
chr22
20033153
20033174
+
hsa-miR-665
chr14
100875075
100875094
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
ADAMTSL4-AS1
chr1
150560202
150574552
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:NA
Title:NA
Author:NA
Journal:NA
Description:NA