Entry Detail


General Information

Database ID:exR0444568
RNA Name:AAMDC
RNA Type:mRNA
Chromosome:chr11
Starnd:+
Coordinate:
Start Site(bp):77821109End Site(bp):77918432
External Links:ENSG00000087884



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ATF6B
chr6
32115264
32128253
-
BAZ2A
chr12
56595596
56636816
-
CALM3
chr19
46601074
46610782
+
EIF3L
chr22
37848868
37889407
+
HAPLN3
chr15
88877288
88895626
-
ILKAP
chr2
238170402
238203708
-
IMP4
chr2
130342877
130347967
+
LHPP
chr10
124461823
124617888
+
MTFR1L
chr1
25818640
25832942
+
RPL18
chr19
48615328
48619184
-
SH3GL1
chr19
4360370
4400547
-
TPM4
chr19
16067021
16103002
+
TTC17
chr11
43358920
43494933
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.