Entry Detail


General Information

Database ID:exR0444623
RNA Name:ABHD10
RNA Type:mRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):111979010End Site(bp):111993368
External Links:ENSG00000144827



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
RPN2
chr20
37178410
37241619
+
STAC2
chr17
39210541
39225945
-
GLUL
chr1
182381704
182392206
-
COL4A2
chr13
110305812
110513209
+
YBX3
chr12
10699089
10723323
-
CXCR4
chr2
136114349
136118149
-
LBHD1
chr11
62662817
62672255
-
PPIA
chr7
44796680
44824564
+
C11orf98
chr11
62662816
62665217
-
RPL13
chr16
89560657
89566828
+
MBD4
chr3
129430944
129440179
-
MTRNR2L8
chr11
10507894
10509186
-
DIDO1
chr20
62877738
62937952
-
MYO1G
chr7
44962662
44979088
-
CTSZ
chr20
58995185
59007254
-
EEF1D
chr8
143579697
143599541
-
AP001458.2
chr11
62649694
62665178
-
TBP
chr6
170554302
170572870
+
RPL3
chr22
39312882
39320389
-
INTS12
chr4
105682627
105895986
-
RPS23
chr5
82273320
82278396
-
ATXN7
chr3
63864557
64003462
+
MPP6
chr7
24573268
24694193
+
RPS5
chr19
58386400
58394806
+
RPL27A
chr11
8682788
8714759
+
TBC1D10B
chr16
30357102
30370494
-
TALDO1
chr11
747415
765012
+
CLCN3
chr4
169612633
169723673
+
ZNF277
chr7
112206695
112343934
+
UBXN7
chr3
196347662
196432430
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.