Entry Detail


General Information

Database ID:exR0444633
RNA Name:ABHD17A
RNA Type:mRNA
Chromosome:chr19
Starnd:-
Coordinate:
Start Site(bp):1876810End Site(bp):1885547
External Links:ENSG00000129968



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
SLC20A2
chr8
42416475
42541926
-
PPP4R3A
chr14
91457611
91510554
-
AP001931.1
chr11
57741779
57804771
+
EFNB2
chr13
106489745
106535662
-
DNAJB1
chr19
14514769
14529770
-
RPS15
chr19
1438358
1440494
+
MSH5-SAPCD1
chr6
31740020
31764851
+
TUBB2A
chr6
3153666
3157544
-
NBEAL2
chr3
46979666
47009704
+
PRPF6
chr20
63981132
64033100
+
PIP5K1C
chr19
3630183
3700479
-
CEBPG
chr19
33373685
33382686
+
NAA16
chr13
41311267
41377030
+
SUPT5H
chr19
39436156
39476670
+
MT-CO2
chrMT
7586
8269
+
LUC7L2
chr7
139340359
139423457
+
AC091167.2
chr15
90249556
90272208
+
ELMO2
chr20
46366050
46432985
-
HNRNPH1
chr5
179614178
179634784
-
ACOT7
chr1
6264269
6394391
-
SETD5
chr3
9397615
9479240
+
ABHD17C
chr15
80679684
80755621
+
GPX4
chr19
1103926
1106791
+
EIF5
chr14
103333544
103345025
+
NUB1
chr7
151341699
151378449
+
FGFR1
chr8
38400215
38468834
-
NF2
chr22
29603556
29698598
+
RBCK1
chr20
407498
430966
+
UPF1
chr19
18831938
18868236
+
SLC25A3
chr12
98593591
98606379
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:NA
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.