Entry Detail


General Information

Database ID:exR0446808
RNA Name:CCL22
RNA Type:mRNA
Chromosome:chr16
Starnd:+
Coordinate:
Start Site(bp):57358783End Site(bp):57366189
External Links:ENSG00000102962



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004922.1
chr7
99325879
99394653
+
AC004997.1
chr22
30285238
30299482
-
AC008763.2
chr19
7629796
7643048
+
AC022384.1
chr3
10249372
10285796
+
AC090360.1
chr18
80034346
80097088
+
AC120057.2
chr17
7240427
7244635
-
AC245033.1
chr15
82536788
82573194
-
ACAA2
chr18
49782164
49813953
-
ACER3
chr11
76860867
77026797
+
ACIN1
chr14
23058564
23095614
-
ACLY
chr17
41866917
41930542
-
ACSL1
chr4
184755595
184826818
-
ACTB
chr7
5527148
5563784
-
ADA
chr20
44619522
44652233
-
ADORA2A
chr22
24417879
24442357
+
AL121758.1
chr20
646626
675800
-
AL603832.3
chr1
112702614
112711433
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC005034.3
chr2
75697583
75697996
+
AC020916.1
chr19
13823880
13842928
-
AC092119.2
chr16
21950218
21951708
-
AC245033.4
chr15
82533175
82540008
-
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.