Entry Detail


General Information

Database ID:exR0446871
RNA Name:CCT5
RNA Type:mRNA
Chromosome:chr5
Starnd:+
Coordinate:
Start Site(bp):10249929End Site(bp):10266389
External Links:ENSG00000150753



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010422.5
chr19
12664828
12669397
-
AC010463.1
chr19
17267418
17282966
+
AC091167.2
chr15
90249556
90272208
+
AC137834.1
chr12
57249609
57296484
-
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ADAM17
chr2
9488486
9556732
-
ADD2
chr2
70607618
70768225
-
ADGRL2
chr1
81306160
81992436
+
ADH5
chr4
99070978
99088801
-
ADNP
chr20
50888916
50931437
-
AGPAT1
chr6
32168212
32178096
-
AGRN
chr1
1020120
1056118
+
AHCYL1
chr1
109984765
110023742
+
AIF1L
chr9
131096476
131123152
+
AKIRIN1
chr1
38991276
39006059
+
AKT1S1
chr19
49869033
49878459
-
AL121594.1
chr14
35122549
35317474
+
AL133352.1
chr10
100505628
100529881
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-302c-3p
chr4
112648366
112648388
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC008649.1
chr19
38596346
38601694
+
AC009831.1
chr18
31942575
31944156
+
AC069281.2
chr7
100572232
100578700
-
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.