Entry Detail


General Information

Database ID:exR0446949
RNA Name:CD74
RNA Type:mRNA
Chromosome:chr5
Starnd:-
Coordinate:
Start Site(bp):150400041End Site(bp):150412929
External Links:ENSG00000019582



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AKT1
chr14
104769349
104795751
-
A4GALT
chr22
42692121
42721298
-
ACTN4
chr19
38647649
38731589
+
AHCY
chr20
34280268
34311802
-
ACTG1
chr17
81509971
81523847
-
AATF
chr17
36948954
37056871
+
AC006064.6
chr12
6556886
6607367
-
AC005258.1
chr19
2269525
2341172
+
AHCYL1
chr1
109984765
110023742
+
AC023055.1
chr12
55757275
55827546
-
AKAP8
chr19
15353385
15379798
-
ALDOA
chr16
30064164
30070457
+
ACTR3
chr2
113890063
113962596
+
ACTR2
chr2
65227753
65271253
+
AL049629.2
chr11
33698261
33722467
-
ACOT9
chrX
23701055
23766475
-
AK3
chr9
4709556
4742043
-
ACAP1
chr17
7336529
7351477
+
AC008982.1
chr19
38817471
38840178
-
ADGRE1
chr19
6887566
6940459
+
AL669918.1
chr6
32813767
32838822
-
AC007192.1
chr19
18153158
18178117
+
ACTB
chr7
5527148
5563784
-
AL590764.2
chrX
71103987
71111575
-
AKR1B1
chr7
134442356
134459284
-
ALDH18A1
chr10
95605941
95656711
-
AC005670.2
chr17
46923133
47049932
+
AIP
chr11
67483026
67491103
+
AKR7A2
chr1
19303965
19312146
-
ACIN1
chr14
23058564
23095614
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-24-3p
chr9
95086064
95086085
+
hsa-miR-7-5p
chr19
4770700
4770723
+
hsa-miR-423-5p
chr17
30117095
30117117
+
hsa-miR-4687-3p
chr11
3856113
3856133
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC004687.1
chr17
58330884
58332508
-
AC007952.4
chr17
19112000
19112636
-
AC016876.2
chr17
7581964
7584086
-
AC020663.1
chr16
4730115
4752565
-
AL137802.2
chr1
16514645
16515754
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.