Entry Detail


General Information

Database ID:exR0447996
RNA Name:CYB5R3
RNA Type:mRNA
Chromosome:chr22
Starnd:-
Coordinate:
Start Site(bp):42617840End Site(bp):42649392
External Links:ENSG00000100243



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCA3
chr16
2275881
2340746
-
ABHD12
chr20
25294742
25390835
-
AC010422.3
chr19
12643831
12648397
-
AC124312.1
chr15
24955034
25000276
+
AC131160.1
chr3
183815568
183884889
-
ADAT3
chr19
1905399
1913447
+
ADD1
chr4
2843857
2930076
+
AGRN
chr1
1020120
1056118
+
AHCY
chr20
34280268
34311802
-
AIF1L
chr9
131096476
131123152
+
AL928654.3
chr14
105487199
105492267
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-491-5p
chr9
20716120
20716141
+
hsa-miR-663a
chr20
26208243
26208264
-
hsa-miR-423-5p
chr17
30117095
30117117
+
hsa-miR-1224-5p
chr3
184241405
184241423
+
hsa-miR-1294
chr5
154347153
154347174
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.