Entry Detail


General Information

Database ID:exR0448095
RNA Name:DBN1
RNA Type:mRNA
Chromosome:chr5
Starnd:-
Coordinate:
Start Site(bp):177456608End Site(bp):177474401
External Links:ENSG00000113758



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABHD8
chr19
17292131
17310236
-
ABL2
chr1
179099330
179229684
-
AC104452.1
chr3
49416777
49429314
-
AC104472.3
chr3
155763043
155854442
-
AC138811.2
chr16
18788063
18801519
-
ACADM
chr1
75724347
75787575
+
ACAP3
chr1
1292390
1309609
-
ACSL3
chr2
222860942
222944639
+
ADAT3
chr19
1905399
1913447
+
ADCY8
chr8
130780301
131040909
-
ADRM1
chr20
62302093
62308862
+
ADSL
chr22
40346500
40390463
+
AGPAT1
chr6
32168212
32178096
-
AKAP8L
chr19
15380050
15419141
-
AL136295.5
chr14
24147548
24166452
+
AL136454.1
chr1
192716132
192716653
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3654
chr7
133034860
133034878
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AC108134.2
chr16
3156736
3157483
-
AC109460.3
chr16
28974804
28990775
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.