Entry Detail


General Information

Database ID:exR0448176
RNA Name:DDOST
RNA Type:mRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):20651767End Site(bp):20661544
External Links:ENSG00000244038



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCF1
chr6
30571393
30597179
+
ABHD14B
chr3
51968510
51983409
-
ABO
chr9
133250401
133276024
-
AC007192.1
chr19
18153158
18178117
+
AC024592.3
chr19
5866171
5903787
-
AC104452.1
chr3
49416777
49429314
-
AC104581.2
chr17
7925931
7930622
-
AC118549.1
chr1
77562416
77683419
-
ACACA
chr17
37084992
37406836
-
ACAP3
chr1
1292390
1309609
-
ACTG1
chr17
81509971
81523847
-
ADAM23
chr2
206443532
206621127
+
ADAMTS19
chr5
129460281
129738683
+
ADD3
chr10
109996368
110135565
+
ADSL
chr22
40346500
40390463
+
AGFG1
chr2
227472152
227561214
+
AGPAT5
chr8
6708642
6761503
+
AHCYL2
chr7
129225023
129430211
+
AL022238.4
chr22
40346529
40410054
+
AL121594.1
chr14
35122549
35317474
+
AL136295.4
chr14
24180395
24190416
-
ALDH1B1
chr9
38392702
38398661
+
ALDH9A1
chr1
165662216
165698863
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC067930.1
chr8
143579636
143580670
+
AC092490.1
chr12
8788253
8795789
+
AC106864.1
chr4
112693047
112706810
-
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.