Entry Detail


General Information

Database ID:exR0448199
RNA Name:DDX3X
RNA Type:mRNA
Chromosome:chrX
Starnd:+
Coordinate:
Start Site(bp):41333284End Site(bp):41364472
External Links:ENSG00000215301



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AATF
chr17
36948954
37056871
+
AC011455.2
chr19
38915404
38949855
-
AC018523.2
chr11
14493783
14520344
-
AC023055.1
chr12
55757275
55827546
-
AC245033.1
chr15
82536788
82573194
-
ACAP3
chr1
1292390
1309609
-
ADGRG6
chr6
142301854
142446266
+
AIF1L
chr9
131096476
131123152
+
AK2
chr1
33007940
33080996
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-217-5p
chr2
55983020
55983042
-
hsa-miR-186-5p
chr1
71067681
71067702
-
hsa-miR-490-3p
chr7
136903242
136903263
+
hsa-miR-514a-3p
chrX
147281957
147281977
-
hsa-miR-513c-5p
chrX
147189753
147189774
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC012236.1
chr15
31221999
31230838
-
AC020663.1
chr16
4730115
4752565
-
AC021078.1
chr5
149494314
149504670
-
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.