Entry Detail


General Information

Database ID:exR0448288
RNA Name:DHCR24
RNA Type:mRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):54849627End Site(bp):54887195
External Links:ENSG00000116133



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABL1
chr9
130713016
130887675
+
AC004832.3
chr22
30409255
30428990
+
AC005258.1
chr19
2269525
2341172
+
AC008763.3
chr19
7678501
7682854
+
AC091167.2
chr15
90249556
90272208
+
AC120057.2
chr17
7240427
7244635
-
ACADSB
chr10
123008979
123058290
+
ACIN1
chr14
23058564
23095614
-
ACTA1
chr1
229431245
229434098
-
ADAR
chr1
154582057
154628013
-
ADGRA3
chr4
22345071
22516066
-
AK2
chr1
33007940
33080996
-
AKIRIN1
chr1
38991276
39006059
+
AKR1B1
chr7
134442356
134459284
-
AL136295.1
chr14
24189157
24213473
-
AL713999.1
chr1
155169409
155187272
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-7-5p
chr19
4770700
4770723
+
hsa-miR-654-5p
chr14
101040234
101040255
+
hsa-miR-541-3p
chr14
101064548
101064569
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC006064.5
chr12
6510275
6510522
+
AC016876.2
chr17
7581964
7584086
-
AC040162.3
chr16
67882461
67886367
+
AC244517.11
chr5
141136683
141245380
-
AD000090.1
chr19
35557956
35581954
+
AL096870.2
chr14
24209646
24215987
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.