Entry Detail


General Information

Database ID:exR0448435
RNA Name:DNAJB6
RNA Type:mRNA
Chromosome:chr7
Starnd:+
Coordinate:
Start Site(bp):157335381End Site(bp):157417439
External Links:ENSG00000105993



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ACER3
chr11
76860867
77026797
+
ACTR3
chr2
113890063
113962596
+
ADAMTS8
chr11
130404923
130428609
-
AFDN
chr6
167826922
167972023
+
AGPAT2
chr9
136673143
136687457
-
AGTPBP1
chr9
85546539
85742029
-
AHCY
chr20
34280268
34311802
-
AL031708.1
chr16
1632259
1686715
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-24-3p
chr9
95086064
95086085
+
hsa-miR-105-5p
chrX
152394458
152394480
-
hsa-miR-185-5p
chr22
20033153
20033174
+
hsa-miR-302b-3p
chr4
112648489
112648511
-
hsa-miR-877-5p
chr6
30584332
30584351
+
hsa-miR-1270
chr19
20399320
20399342
-
hsa-miR-4709-5p
chr14
74480175
74480196
-
hsa-miR-4709-3p
chr14
74480135
74480157
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC106864.1
chr4
112693047
112706810
-
AL035458.2
chr20
34234840
34281173
-
AL132780.1
chr14
22929607
22956374
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.