Entry Detail


General Information

Database ID:exR0448812
RNA Name:EIF3L
RNA Type:mRNA
Chromosome:chr22
Starnd:+
Coordinate:
Start Site(bp):37848868End Site(bp):37889407
External Links:ENSG00000100129



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AAMDC
chr11
77821109
77918432
+
ACLY
chr17
41866917
41930542
-
AC008763.3
chr19
7678501
7682854
+
AHCYL1
chr1
109984765
110023742
+
ACBD3
chr1
226144679
226186741
-
ADD1
chr4
2843857
2930076
+
AASS
chr7
122073549
122144255
-
AGPS
chr2
177392757
177559299
+
AC245033.1
chr15
82536788
82573194
-
ACTA1
chr1
229431245
229434098
-
AC023055.1
chr12
55757275
55827546
-
AC007192.1
chr19
18153158
18178117
+
ACIN1
chr14
23058564
23095614
-
ABCD3
chr1
94418389
94518666
+
ADAMTSL4
chr1
150549369
150560937
+
AAMP
chr2
218264123
218270257
-
ADH5
chr4
99070978
99088801
-
AL033529.1
chr1
32465057
32600792
+
AGPAT5
chr8
6708642
6761503
+
ABCF2
chr7
151207837
151227166
-
AL513165.2
chr9
37512547
37592469
-
ABCA1
chr9
104781006
104928155
-
ACTR3B
chr7
152759749
152855378
+
AL139353.1
chr14
31334312
31457441
-
AC010615.4
chr19
21405159
21491266
+
ACADVL
chr17
7217125
7225266
+
AL035078.4
chr11
31812391
32104665
+
ABR
chr17
1003518
1229738
-
AL358113.1
chr9
69035747
69255187
+
ACTB
chr7
5527148
5563784
-
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-155-5p
chr21
25573983
25574006
+
hsa-miR-1248
chr3
186786675
186786701
+
hsa-miR-6733-3p
chr1
43171652
43171671
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC008738.7
chr19
33207129
33207639
+
AC012213.4
chr8
103481266
103481619
-
AC016876.2
chr17
7581964
7584086
-
AC024940.6
chr12
31280422
31280895
-
AC079781.5
chr7
97851688
97972985
-
AC245014.3
chr1
145281116
145281462
+
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.