Entry Detail


General Information

Database ID:exR0448825
RNA Name:EIF4G1
RNA Type:mRNA
Chromosome:chr3
Starnd:+
Coordinate:
Start Site(bp):184314495End Site(bp):184335358
External Links:ENSG00000114867



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCB8
chr7
151028422
151047782
+
ABL1
chr9
130713016
130887675
+
ABL2
chr1
179099330
179229684
-
AC010422.3
chr19
12643831
12648397
-
AC011455.2
chr19
38915404
38949855
-
AC025165.3
chr12
57772660
57797554
+
AC137834.1
chr12
57249609
57296484
-
ACTB
chr7
5527148
5563784
-
ACTR2
chr2
65227753
65271253
+
ADAMTS1
chr21
26835755
26845409
-
ADGRV1
chr5
90529344
91164437
+
AIDA
chr1
222668013
222713210
-
AK2
chr1
33007940
33080996
-
AKAP12
chr6
151239967
151358559
+
AKAP8L
chr19
15380050
15419141
-
AKIRIN2
chr6
87674860
87702233
-
AKT2
chr19
40230317
40285536
-
ALCAM
chr3
105366909
105576900
+
ALDH3A2
chr17
19648136
19685760
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-6797-3p
chr19
41869675
41869696
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC008124.1
chr12
45718046
45727775
-
AC124068.2
chr15
89335053
89336161
+
AC245014.3
chr1
145281116
145281462
+
AL096870.2
chr14
24209646
24215987
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.