Entry Detail


General Information

Database ID:exR0449043
RNA Name:ERP29
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):112013348End Site(bp):112023449
External Links:ENSG00000089248



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC015813.2
chr17
57989038
58007246
-
AC027796.3
chr17
3585149
3636249
-
AC091959.3
chr5
146203550
146339251
+
AC245033.1
chr15
82536788
82573194
-
ACADVL
chr17
7217125
7225266
+
ACAP2
chr3
195274745
195443044
-
ACTG1
chr17
81509971
81523847
-
ADAR
chr1
154582057
154628013
-
ADD1
chr4
2843857
2930076
+
ADGRL3
chr4
61201258
62078335
+
AFAP1
chr4
7758714
7939926
-
AIMP2
chr7
6009255
6023834
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-423-3p
chr17
30117131
30117153
+
hsa-miR-4709-5p
chr14
74480175
74480196
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC007952.4
chr17
19112000
19112636
-
AC245033.4
chr15
82533175
82540008
-
AD000090.1
chr19
35557956
35581954
+
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.