Entry Detail


General Information

Database ID:exR0449410
RNA Name:FBXL19
RNA Type:mRNA
Chromosome:chr16
Starnd:+
Coordinate:
Start Site(bp):30923055End Site(bp):30948783
External Links:ENSG00000099364



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCA2
chr9
137007234
137028922
-
ABL2
chr1
179099330
179229684
-
ABRACL
chr6
139028745
139043302
+
AC018523.2
chr11
14493783
14520344
-
AC233992.2
chr8
144353228
144355609
-
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ADAMTS19
chr5
129460281
129738683
+
ADRM1
chr20
62302093
62308862
+
AFF3
chr2
99545419
100192428
-
AGO3
chr1
35930718
36072500
+
AGRN
chr1
1020120
1056118
+
AL031708.1
chr16
1632259
1686715
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-22-3p
chr17
1713914
1713935
-
hsa-miR-324-3p
chr17
7223308
7223330
-
hsa-miR-625-5p
chr14
65471116
65471136
+
hsa-miR-423-5p
chr17
30117095
30117117
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC125807.2
chr12
3041437
3044950
+
AC135048.1
chr16
30948386
30956511
+
AC245014.3
chr1
145281116
145281462
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.