Entry Detail


General Information

Database ID:exR0449947
RNA Name:GDI2
RNA Type:mRNA
Chromosome:chr10
Starnd:-
Coordinate:
Start Site(bp):5765223End Site(bp):5842132
External Links:ENSG00000057608



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ADH5
chr4
99070978
99088801
-
ABHD17A
chr19
1876810
1885547
-
ADIPOR2
chr12
1688574
1788674
+
ACAA2
chr18
49782164
49813953
-
AC026954.2
chr17
7312661
7319174
-
AC010422.3
chr19
12643831
12648397
-
AC245033.1
chr15
82536788
82573194
-
AC008763.2
chr19
7629796
7643048
+
ADCY6
chr12
48766194
48789037
-
ADO
chr10
62804720
62808479
+
ACTB
chr7
5527148
5563784
-
ADK
chr10
74151202
74709963
+
AC073283.3
chr2
47065941
47176511
-
ACADVL
chr17
7217125
7225266
+
ALDOA
chr16
30064164
30070457
+
AD000671.1
chr19
35745678
35754519
+
ACADM
chr1
75724347
75787575
+
ADCY2
chr5
7396138
7830081
+
ADAMTS19
chr5
129460281
129738683
+
ADAMTS13
chr9
133414358
133459402
+
ACTG1
chr17
81509971
81523847
-
ACSL3
chr2
222860942
222944639
+
AC073508.2
chr17
40627356
40665141
-
AFDN
chr6
167826922
167972023
+
AFG3L2
chr18
12328944
12377227
-
ACOT9
chrX
23701055
23766475
-
ALDH18A1
chr10
95605941
95656711
-
AC000093.1
chr22
19717220
19724772
+
ACSS2
chr20
34872146
34927962
+
ABHD17B
chr9
71862452
71910931
-
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC009446.1
chr8
71675300
71702786
+
AC010542.4
chr16
66549280
66551189
+
AC016876.2
chr17
7581964
7584086
-
AC124068.2
chr15
89335053
89336161
+
AC147067.1
chr4
1574062
1580253
-
AC245033.4
chr15
82533175
82540008
-
AL021707.2
chr22
38667585
38681847
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.