Entry Detail


General Information

Database ID:exR0450019
RNA Name:GJA1
RNA Type:mRNA
Chromosome:chr6
Starnd:+
Coordinate:
Start Site(bp):121435595End Site(bp):121449727
External Links:ENSG00000152661



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AASS
chr7
122073549
122144255
-
ABCB7
chrX
75051048
75156732
-
ABHD16A
chr6
31686955
31703356
-
ABHD17C
chr15
80679684
80755621
+
AC015813.2
chr17
57989038
58007246
-
AC036214.3
chr8
79918860
80080775
-
AC073508.2
chr17
40627356
40665141
-
AC245033.1
chr15
82536788
82573194
-
ACAA2
chr18
49782164
49813953
-
ACIN1
chr14
23058564
23095614
-
ACLY
chr17
41866917
41930542
-
ACOT7
chr1
6264269
6394391
-
ACP1
chr2
264140
278283
+
ADGRL2
chr1
81306160
81992436
+
ADK
chr10
74151202
74709963
+
AFG3L2
chr18
12328944
12377227
-
AGBL5
chr2
27042364
27070622
+
AL049844.3
chr6
143857318
143938471
+
AL136454.1
chr1
192716132
192716653
+
ALDH9A1
chr1
165662216
165698863
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AC064802.1
chr8
114282067
114295839
+
AF106564.1
chr8
24912165
24914717
-
AL021707.2
chr22
38667585
38681847
-
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.