Entry Detail


General Information

Database ID:exR0450767
RNA Name:HNRNPA0
RNA Type:mRNA
Chromosome:chr5
Starnd:-
Coordinate:
Start Site(bp):137745651End Site(bp):137754363
External Links:ENSG00000177733



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AACS
chr12
125065434
125143333
+
ABCA2
chr9
137007234
137028922
-
AC005258.1
chr19
2269525
2341172
+
AC006030.1
chr2
74211604
74363377
-
AC010422.3
chr19
12643831
12648397
-
AC010463.1
chr19
17267418
17282966
+
AC087289.3
chr17
75898645
75930129
-
AC093525.2
chr16
2496032
2520218
+
AC097637.1
chr3
52221081
52231190
-
AC099811.2
chr17
42119674
42154916
-
AC107871.1
chr15
68184032
68229718
-
AC129492.3
chr17
8150816
8162975
-
AC135050.2
chr16
31083439
31094956
-
ACAT2
chr6
159762045
159779112
+
ACOT7
chr1
6264269
6394391
-
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTN1
chr14
68874143
68979440
-
ADAR
chr1
154582057
154628013
-
AGGF1
chr5
77029251
77065234
+
AKAP8
chr19
15353385
15379798
-
AKIRIN1
chr1
38991276
39006059
+
AL021546.1
chr12
120438198
120460006
+
AL117348.2
chr1
225886696
225924278
-
AL121594.1
chr14
35122549
35317474
+
AL136531.2
chr20
1317571
1393096
-
AL365205.1
chr6
41780349
41790141
+
ALAS1
chr3
52198086
52214327
+
ALDOA
chr16
30064164
30070457
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-21-5p
chr17
59841273
59841294
+
hsa-miR-1181
chr19
10403505
10403525
-
hsa-miR-1248
chr3
186786675
186786701
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC002094.1
chr17
28357647
28381697
+
AC007952.4
chr17
19112000
19112636
-
AC010327.5
chr19
55216660
55221616
+
AC012485.1
chr2
238231684
238255633
+
AC016876.2
chr17
7581964
7584086
-
AC068134.2
chr2
232420661
232421461
-
AC087190.3
chr16
9104848
9113181
+
AC132217.1
chr11
2129121
2129964
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.