Entry Detail


General Information

Database ID:exR0450782
RNA Name:HNRNPK
RNA Type:mRNA
Chromosome:chr9
Starnd:-
Coordinate:
Start Site(bp):83968083End Site(bp):83980616
External Links:ENSG00000165119



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCA2
chr9
137007234
137028922
-
ABCF2
chr7
151207837
151227166
-
ABHD3
chr18
21650901
21704780
-
ABHD4
chr14
22598237
22613215
+
AC000093.1
chr22
19717220
19724772
+
AC010422.3
chr19
12643831
12648397
-
AC026464.4
chr16
69299682
69322700
+
AC048338.1
chr12
122207779
122266423
-
AC091167.2
chr15
90249556
90272208
+
AC093525.2
chr16
2496032
2520218
+
AC138811.2
chr16
18788063
18801519
-
ACAP1
chr17
7336529
7351477
+
ACO2
chr22
41469117
41528989
+
ACTB
chr7
5527148
5563784
-
ACTN1
chr14
68874143
68979440
-
ACTN4
chr19
38647649
38731589
+
ACVRL1
chr12
51906908
51923361
+
ADAM8
chr10
133262420
133276868
-
ADAT3
chr19
1905399
1913447
+
AFG3L2
chr18
12328944
12377227
-
AGPAT1
chr6
32168212
32178096
-
AGTPBP1
chr9
85546539
85742029
-
AKT1
chr14
104769349
104795751
-
AKT3
chr1
243488233
243851079
-
AL358113.1
chr9
69035747
69255187
+
ALAD
chr9
113386312
113401290
-
ALDOA
chr16
30064164
30070457
+
miRNA targets:NA
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AC020978.7
chr16
68224713
68227734
+
AC023509.1
chr12
53441741
53467528
+
AC106864.1
chr4
112693047
112706810
-
AC242426.2
chr1
147172755
147295734
+
AL022311.1
chr22
37876148
37895563
+
AL121992.1
chr1
15586136
15603626
-
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.