Entry Detail


General Information

Database ID:exR0450787
RNA Name:HNRNPU
RNA Type:mRNA
Chromosome:chr1
Starnd:-
Coordinate:
Start Site(bp):244840638End Site(bp):244864560
External Links:ENSG00000153187



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCC4
chr13
95019835
95301475
-
AC004922.1
chr7
99325879
99394653
+
AC010422.3
chr19
12643831
12648397
-
AC012184.2
chr16
70299194
70372582
+
AC116366.3
chr5
132410832
132646079
+
AC131160.1
chr3
183815568
183884889
-
AC138811.2
chr16
18788063
18801519
-
AC140504.1
chr16
15395754
15515348
+
ACLY
chr17
41866917
41930542
-
ACSL3
chr2
222860942
222944639
+
ACTA1
chr1
229431245
229434098
-
ACTB
chr7
5527148
5563784
-
ACTG1
chr17
81509971
81523847
-
ACTR1A
chr10
102461881
102502712
-
ADARB1
chr21
45073853
45226560
+
ADD1
chr4
2843857
2930076
+
ADGRV1
chr5
90529344
91164437
+
ADPRHL2
chr1
36088892
36093932
+
AFTPH
chr2
64524305
64593005
+
AGO2
chr8
140520156
140635633
-
AGO4
chr1
35808016
35857890
+
AGRN
chr1
1020120
1056118
+
AHCY
chr20
34280268
34311802
-
AIDA
chr1
222668013
222713210
-
AKAP8L
chr19
15380050
15419141
-
AKNA
chr9
114334156
114394405
-
AL136531.2
chr20
1317571
1393096
-
AL138752.2
chr9
37588413
38068687
-
ALDH1B1
chr9
38392702
38398661
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-1244
chr2
231713368
231713393
+
hsa-miR-3654
chr7
133034860
133034878
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC010542.4
chr16
66549280
66551189
+
AC016876.2
chr17
7581964
7584086
-
AC124068.2
chr15
89335053
89336161
+
AC132217.1
chr11
2129121
2129964
-
AC245014.3
chr1
145281116
145281462
+
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.