Entry Detail


General Information

Database ID:exR0450895
RNA Name:HSP90B1
RNA Type:mRNA
Chromosome:chr12
Starnd:+
Coordinate:
Start Site(bp):103930107End Site(bp):103953645
External Links:ENSG00000166598



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
AARS2
chr6
44298731
44313347
-
AC010422.3
chr19
12643831
12648397
-
AC099811.2
chr17
42119674
42154916
-
AC135050.2
chr16
31083439
31094956
-
AC139530.2
chr17
81703371
81720539
+
ACTG1
chr17
81509971
81523847
-
ACTG2
chr2
73892314
73919865
+
ACTR2
chr2
65227753
65271253
+
ADA2
chr22
17178790
17258235
-
ADAM23
chr2
206443532
206621127
+
ADCY6
chr12
48766194
48789037
-
AFP
chr4
73431138
73456174
+
AKR1A1
chr1
45550543
45570049
+
AL136454.1
chr1
192716132
192716653
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-3652
chr12
103930425
103930442
+
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC016876.2
chr17
7581964
7584086
-
AC022819.1
chr15
99157231
99161140
-
AC068768.1
chr12
123262060
123262402
+
AC108134.2
chr16
3156736
3157483
-
AKT3-IT1
chr1
243793205
243794400
-
AL022311.1
chr22
37876148
37895563
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.