Entry Detail


General Information

Database ID:exR0451053
RNA Name:IGF2BP3
RNA Type:mRNA
Chromosome:chr7
Starnd:-
Coordinate:
Start Site(bp):23310209End Site(bp):23470491
External Links:ENSG00000136231



Disease Information

Disease Name:
Disease Category:
MeSH ID:
Type:
Alias:



Expression Detail

GEO ID:GSE122377
Description:Tuberculous Meningitis in Pediatric Patients [CSF]
Experimental Design:Disease Sample Source
Case Disease Type:Pediatric TB meningitis
Case Disease SubType:NA
Case Sample:Ventricular Cerebrospinal Fluid
Control Sample:Lumbar Puncture Cerebrospinal Fluid
Number of Case:12
Number of Control:12
Number of Samples:24





Regulatory Relationship

mRNA targets:
Gene SymbolChromosomeStart Site(bp)End Site(bp)Strand
ABCA1
chr9
104781006
104928155
-
AC073508.2
chr17
40627356
40665141
-
AC073896.1
chr12
56285916
56316059
-
AC135050.2
chr16
31083439
31094956
-
AKIRIN1
chr1
38991276
39006059
+
AL121594.1
chr14
35122549
35317474
+
AL133352.1
chr10
100505628
100529881
-
AL365205.1
chr6
41780349
41790141
+
miRNA targets:
miRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
hsa-miR-27a-3p
chr19
13836447
13836467
-
hsa-miR-181a-5p
chr1
198859108
198859130
-
hsa-miR-181b-5p
chr9
124693725
124693747
+
hsa-miR-181c-5p
chr19
13874725
13874746
+
hsa-miR-27b-3p
chr9
95085505
95085525
+
hsa-miR-320a-3p
chr8
22244975
22244996
-
hsa-miR-382-5p
chr14
101054316
101054337
+
hsa-miR-513a-5p
chrX
147213538
147213555
-
hsa-miR-320b
chr1
224257049
224257070
-
circRNA targets:NA
lncRNA targets:
lncRNA SymbolChromosomeStart Site(bp)End Site(bp)Strand
AC021078.1
chr5
149494314
149504670
-
AC133644.3
chr2
87455476
87767359
+
AD000090.1
chr19
35557956
35581954
+
Display:



Experiment Detail

GEO ID:NA
Sample Source:NA
Source Fraction:NA
Platform:NA
Method:NA
Num of detected RNA Type:NA
Num of detected RNAs of this Type:NA
Sample treatment protocol:NA
RNA Extract protocol:NA
RNA library preparation protocol:NA



Reference

PMID:31434901
Title:Tuberculous meningitis in children is characterized by compartmentalized immune responses and neural excitotoxicity
Author:Rohlwink UK, Figaji A, Wilkinson KA, Horswell S, Sesay AK, Deffur A, Enslin N, Solomons R, Van Toorn R, Eley B, Levin M, Wilkinson RJ, Lai RPJ
Journal:Nat Commun. 2019 Aug 21;10(1):3767.
Description:Differential transcript expression of TBM cases are compared with healthy controls in whole blood and with non-TB cerebral infection controls in CSF.